Specifically the workshop addressed:
- The perspectives and potential of genomic information usage in medicine and public health
- The vision of interdisciplinary approaches to the analysis of genome sequencing data
- The challenges for the generation and management of very large volumes of genome sequencing data
- The status, progresses of sequencing technology and associate data generation features
- The reasons for supporting seamless availability and exchange of genome sequencing data for improving scientific progress yielded by wider data volume analysis
- A status report on the development of the ISO genomic compression standard and an overview of its new features and performance
Venue:
San Diego Marriott La Jolla, 4240 La Jolla Village Drive
San Diego, CA 92037, United States
(see also the 122nd MPEG meeting for more details)
Organizing Committee:
Joern Ostermann (TNT-LUH), Claudio Alberti (GenomSys), Rongshan Yu (Aginome Scientific), Tom Paridaens (imec and UGent)
Program
Start |
End |
What |
Who |
12:30 |
13:00 |
Registration |
|
13:00 |
13:15 |
Welcome & workshop goals |
|
13:15 |
13:40 |
“Genome and medical information portability, retrieval and analysis” |
Amalio Telenti (Scripps Research Institute, USA) |
13:40 |
14:05 |
“From womb to tomb sequencing: on the advantages on bringing multidisciplinary R&D to develop standards and analytics” |
Ioannis Xenarios, (SIB Switzerland) |
14:05 |
14:30 |
“Future of Genomics and Big Data” |
Dawn Barry (Luna DNA, USA) |
14:30 |
14:55 |
“Generation and Management of Large Sequence Files: Perspectives from the DNA Sequencing Core” |
Alvaro G. Hernandez (UIUC DNA Services, USA) |
14:55 |
15:10 |
Presentation of demonstrations |
GenomSys, Aginome Scientific |
15:10 |
15:40 |
Demo session and Coffee Break |
|
15:40 |
16:05 |
“The role of compression in the genomics data life cycle” |
Come Raczy (Illumina Inc., USA) |
16:05 |
16:30 |
Genomics at Rady’s Children Hospital San Diego |
Ray Veeraraghavan (Rady’s Children Hospital San Diego, USA) |
16:30 |
16:55 |
“An overview of the MPEG-G standard for the compression and processing of genomic sequencing data” |
Marco Mattavelli (EPFL, Switzerland) |
Demonstrations of genome sequencing data processing prototypes and products
Co-located with the workshop GenomSys and Aginome Scientific showed demos, prototypes and products related to genome sequencing data processing analytics, compression and storage.